The pelagic habitat analysis module for ecosystem‐based fisheries science and management

We have developed a set of tools that operate within an aquatic geographic information system to improve the accessibility, and usability of remote‐sensed satellite and computer‐modeled oceanographic data for marine science and ecosystem‐based management. The tools form the Pelagic Habitat Analysis Module (PHAM), which can be applied as a modeling platform, an investigative aid in scientific research, or utilized as a decision support system for marine ecological management. Applications include fisheries, marine biology, physical and biological oceanography, and marine spatial management. The GIS provides a home for diverse data types and automated tools for downloading remote sensed and global circulation model data. Within the GIS environment, PHAM provides a framework for seamless interactive four‐dimensional visualization, for matching between disparate data types, for flexible statistic or mechanistic model development, and for dynamic application of user developed models for habitat, density, and probability predictions. Here we describe PHAM in the context of ecosystem‐based fisheries management, and present results from case study projects which guided development. In the first, an analysis of the purse seine fishery for tropical tuna in the eastern Pacific Ocean revealed oceanographic drivers of the catch distribution and the influence of climate‐driven circulation patterns on the location of fishing grounds. To support management of the Common Thresher Shark (Alopias vulpinus) in the California Current Ecosystem, a simple empirical habitat utilization model was developed and used to dynamically predict the seasonal range expansion of common thresher shark based on oceanographic conditions.     

Artificial neural network modeling of microbial community structures in the Atlantic Forest of Brazil

Microbial communities vary across the landscape in forest soils, but prediction of their biomass and composition is a difficult challenge due to the large numbers of variables that influence their community structures. Here we examine the use of artificial neural network (ANN) models for extraction of patterns among soil chemical variables and microbial community structures in forest soils from three regions of the Atlantic Forest of Brazil. At each location, variations in soil chemical properties and FAME profiles of microbial community structures were mapped at 20 × 20 m intervals within 10 ha parcels. Geostatistical analyses showed that spatial variability in soil physical and chemical variables could be mapped at scale distances of 20 m, but that FAME profiles representing the microbial communities were highly variable and had no spatial dependence at the same scale in most cases. RDA analysis showed that FAME signatures representing different microbial groups were positively associated with soil pH, OM, P and base cations concentrations, whereas microbial biomass was negatively associated with the same environmental factors. In contrast, ANN models revealed clear relationships between microbial community structures at each parcel location, and generated verifiable predictions of variations in FAME profiles in relation to soil pH, texture, and the relative abundances of base cations. The results suggest that ANN modeling provides a useful approach for describing the relationships between microbial community structures and soil properties in tropical forest soils that were not able to be captured using geostatistical and RDA analyses.     

海南岛甘什岭热带低地雨林植物组成与地理成分

为揭示海南岛甘什岭热带低地雨林区域植物群落特征、性质和规律,以期为进一步分析生物多样性保育与恢复策略及生态服务功能评估等提供科学依据,在海南岛南部甘什岭自然保护区选择典型低地雨林建立1 hm~2固定样地,进行立地因子和植被调查,并研究其物种组成与地理成分。结果表明:维管植物隶属于65科150属213种,种子植物63科148属211种,分别占海南岛和全国种子植物总科、属、种的32.66%、19.29%,13.56%、4.69%和7.65%、0.78%~0.81%;优势科明显,单种科36个,寡种科24个,共占总科数的92.31%;属内种的变化范围为1~6,单种属最多,占总数的76.00%;科和属的分布区类型均以泛热带分布为主,热带性质占绝对优势,这不同于尖峰岭山地雨林热带-亚热带过度性明显的特点;根据种-面积曲线研究表明,甘什岭热带低地雨林最小取样面积为范围在3 600~6 400 m~2之间,其上限高于海南岛霸王岭热带山地雨林的4 000 m~2最小面积;相较于山地雨林,其植物种类较丰富,地理成分更复杂。     

Intercropping soybean and palisade grass for enhanced land use efficiency and revenue in a no till system

Integrated no-till crop and livestock production systems may help rejuvenate degraded pastures, increase land use efficiency (LUE), and increase enterprise revenue. Our objectives were to evaluate: (1) planting date effects on seed yield and nutrient concentration of an early-maturing, no-till system (NTS) soybean (Glycine max) when intercropped with palisade grass (Brachiaria brizantha); (2) dry matter production and protein concentration of the grass pasture after soybean harvest; and (3) overall revenue and LUE for the intercrop system. Experiments were performed during two growing seasons in Botucatu, Brazil using a randomized complete block experimental design. When palisade grass and soybean were sown simultaneously, soybean yield averaged 3.28 Mg ha⁻¹. Similar seed yields were observed when palisade grass was planted either 30 d after soybean emergence (DAE) (3.29 Mg ha⁻¹) or at the soybean reproductive stage R6 (full seed) (3.50 Mg ha⁻¹). Monocrop soybean yield averaged 3.50 Mg ha⁻¹. First cut dry matter forage production was greater when palisade grass was sown at the same time as soybean or 30 DAE of soybean. This indicates that interseeding palisade grass with soybean does not significantly affect soybean nutrition or yield. Intercropping did increase LUE and resulted in 1.6 times more revenue than soybean alone. However, sowing palisade grass at the soybean reproductive stage R6 (full seed) significantly reduced the forage yield compared to early planting.     

热带海岸次生林群落主要乔木的种间关联分析

对热带海岸次生林群落主要乔木种群的重要值、方差比率、χ~2统计量和Ochiai(OI)指数等种间联结性指标进行测定,旨在揭示该群落优势种群之间相互作用的内在关联及种对间关联性的内在规律。结果表明:香蒲桃是热带海岸次生林群落的主要建群种;热带海岸次生林群落19个主要种群总体关联性表现为不显著正关联,反映了该群落尚未达到稳定的演替阶段;χ~2检验结果显示该群落优势种群正关联种对与负关联种对数量相当,无关联种对数较少,分别占总对数的42.7%、43.3%和14.0%,显著正关联种对数为1对,极显著和显著负关联种对数为2对;Ochiai(OI)指数显示66对种对的OI值落在[0.6,1],反映出热带海岸次生林主要种对间关联程度较为紧密。综上所述,热带海岸次生林群落优势种群种对间种间关联明显,物种之间存在一定的独立性,整体趋向稳定发展,实践中为加快热带次生林演替的进程,应重点保护正联结性较强的树种。     

我国热区疫霉种的分布、疫病及其防治研究进展

综述了我国热带地区疫霉种类及其引起的植物病害,并总结了疫病的防治措施,最后对疫病防治的新策略进行了展望。     

Influence of biomineralization on the physico-mechanical profile of a tropical soil affected by erosive processes

Most of the soils of tropical countries are affected by erosion processes. As a result, much attention has been dedicated to the use of microorganisms to improve the geotechnical properties and stability of soils in the context of “bioengineering”. This work was carried out to analyze the effects of the use of a CaCO₃ precipitating nutrient on native microbiota with the aim of mitigating the erosion processes in a tropical soil profile. We observed that the use of nutrient B4 enabled native bacteria present in the soil to precipitate calcium carbonate, resulting in improvements in the physical, chemical, mineralogical and mechanical properties of the soil, which allowed the mitigation of the erosion processes that characterize the soil profile studied.     

Characteristics and decomposition rates of pruning residues from a shaded coffee system in Southeastern Brazil

In the Zona da Mata Mineira of Southeastern Brazil the development of sustainable land requires the integration of crops with trees. The objectives of this study then were to (i) characterize prunings from the main tree species in an agroforestry system; (ii) determine the effects of the physical and chemical characteristics of the prunings on their decomposition patterns in the laboratory; (iii) assess the effect of mixing leaves of different species on decomposition rates; and (iv) propose a decomposition index for the residues studied. The study was carried out with pruning residues from Cajanus cajan, Solanum variable, Cassia ferruginea, Piptadenia gonoacantha, Croton urucurana, and Melinis multiflora. The materials were characterized for total C, N, P, Ca, Mg and K contents; lignin, cellulose, hemicellulose and soluble polyphenols contents. The pruning residues had high polyphenols and lignin contents, high C:N and C:P ratios, and low contents of Ca, Mg, and K. The low decomposition rates of the prunings were related to the P, K, hemicellulose and polyphenol contents. The rates of N mineralization from most of the residues indicate that there is a potential to supply the needs of a crop of maize. The residues of some species, if decomposed alone, would not supply sufficient nutrients, and need to be mixed with leaves of other species.This revised version was published online in November 2005 with corrections to the Cover Date.     

Leaf-litter decomposition of 15 tree species in a lowland tropical rain forest in Sarawak: dynamics of carbon,nutrients, and organic constituents

The effects of tree species on the dynamics of nutrient transformations during leaf-litter decomposition are not well understood in tropical rain forests. To examine differences in the dynamics of C, nutrients, and organic constituents during decomposition among tree species, the leaf-litter decomposition of 15 trees was assessed using a litter-bag method in a lowland tropical rain forest in Sarawak. The dynamics of C was parallel to that of weight loss. The dynamics of nutrients were grouped into three patterns. The dynamics of K was characterized by a high leaching loss in the initial stages, and that of Ca and Mg generally showed a gradual decrease over the course of decomposition. The dynamics of N and P showed highly different patterns with the weight loss, and was characterized by relatively higher remaining mass at the end of the experiment. The variations or exceptions of nutrient dynamics among tree species were considered to be related to the initial concentration of each nutrient. For the dynamics of organic constituents, water-soluble carbohydrates disappeared quickly at the initial stages, and acid-soluble carbohydrates were the second fastest decomposing fraction; the decomposition of acid-insoluble residue (AIS) was the slowest. The release of limiting nutrients (N and P) generally followed the disappearance of AIS, but was independent of the disappearance of AIS when the initial concentrations of these nutrients were very low.